Search Weight Loss Topics:




Apr 25

Gut microbiome responds compositionally and functionally to the … – Nature.com

de La Torre, S., Snowdon, C. T. & Bejarano, M. Effects of human activities on wild pygmy marmosets in Ecuadorian Amazonia. Biol. Conserv. 94, 153163 (2000).

Article Google Scholar

Turvey, S. T. & Crees, J. J. Extinction in the Anthropocene. Curr. Biol. 29, R982R986 (2019).

Article CAS PubMed Google Scholar

Newbold, T. et al. Global effects of land use on local terrestrial biodiversity. Nature 520, 4550 (2015).

Article CAS PubMed Google Scholar

di Marco, M., Venter, O., Possingham, H. P. & Watson, J. E. M. Changes in human footprint drive changes in species extinction risk. Nat. Commun. 9, 19 (2018).

Article Google Scholar

Ceballos, G. & Ehrlich, P. R. Mammal population losses and the extinction crisis. Science 296, 904907 (2002).

Article CAS PubMed Google Scholar

Yang, L., Shi, K. C., Ma, C., Ren, G. P. & Fan, P. F. Mechanisms underlying altitudinal and horizontal range contraction: the western black crested gibbon. J. Biogeogr. 48, 321331 (2021).

Article Google Scholar

Li, X. et al. Human impact and climate cooling caused range contraction of large mammals in China over the past two millennia. Ecography 38, 7482 (2015).

Article Google Scholar

Fan, P. F., Ni, Q. Y., Sun, G. Z., Huang, B. & Jiang, X. L. Gibbons under seasonal stress: The diet of the black crested gibbon (Nomascus concolor) on Mt. Wuliang, Central Yunnan, China. Primates 50, 3744 (2009).

Article PubMed Google Scholar

Hanya, G. Seasonal variations in the activity budget of Japanese macaques in the coniferous forest of Yakushima: effects of food and temperature. Am. J. Primatol. 63, 165177 (2004).

Article PubMed Google Scholar

Mcconkey, K. R., Aldy, F., Ario, A. & Chivers, D. J. Selection of fruit by Gibbons (Hylobates muelleriagilis) in the Rain Forests of Central Borneo. Int. J. Primatol. 23, 123145 (2002).

Article Google Scholar

Amato, K. R. et al. Habitat degradation impacts black howler monkey (Alouatta pigra) gastrointestinal microbiomes. ISME J. 7, 13441353 (2013).

Article CAS PubMed PubMed Central Google Scholar

McKenney, E. A., OConnell, T. M., Rodrigo, A. & Yoder, A. D. Feeding strategy shapes gut metagenomic enrichment and functional specialization in captive lemurs. Gut Microbes 9, 202217 (2018).

Article CAS PubMed PubMed Central Google Scholar

Baniel, A. et al. Seasonal shifts in the gut microbiome indicate plastic responses to diet in wild geladas. Microbiome 9, 120 (2021).

Article Google Scholar

Hicks, A. L. et al. Gut microbiomes of wild great apes fluctuate seasonally in response to diet. Nat. Commun. 9, 118 (2018).

Article CAS Google Scholar

Huang, G. et al. Seasonal shift of the gut microbiome synchronizes host peripheral circadian rhythm for physiological adaptation to a low-fat diet in the giant panda. Cell Rep. 38, 110203 (2022).

Article CAS PubMed Google Scholar

Fan, P. F. et al. Description of a new species of Hoolock gibbon (Primates: Hylobatidae) based on integrative taxonomy. Am. J. Primatol. 79, e22631 (2017).

Article Google Scholar

Fan, P. F., Turvey, S. T. & Bryant, J. V. Hoolock tianxing (amended version of 2019 assessment). IUCN Red List of Threatened Species 20202021 (2020).

McGrosky, A. et al. Gross intestinal morphometry and allometry in primates. Am. J. Primatol. 81, e23035 (2019).

PubMed Google Scholar

Fan, P. F., Ai, H.-S., Fei, H. L., Zhang, D. & Yuan, S. D. Seasonal variation of diet and time budget of Eastern hoolock gibbons (Hoolock leuconedys) living in a northern montane forest. Primates 54, 137146 (2013).

Article PubMed Google Scholar

Kartzinel, T. R., Hsing, J. C., Musili, P. M., Brown, B. R. P. & Pringle, R. M. Covariation of diet and gut microbiome in African megafauna. Proc. Natl Acad. Sci. USA 116, 2358823593 (2019).

Article CAS PubMed PubMed Central Google Scholar

Ley, R. E. et al. Evolution of mammals and their gut microbes. Science 320, 16471651 (2008).

Article CAS PubMed PubMed Central Google Scholar

Levin, D. et al. Diversity and functional landscapes in the microbiota of animals in the wild. Science 372, eabb5352 (2021).

Article CAS PubMed Google Scholar

Xiao, K. P. et al. Adaptation of gut microbiome and host metabolic systems to lignocellulosic degradation in bamboo rats. ISME J. 16, 19801992 (2022).

Article CAS PubMed PubMed Central Google Scholar

Solden, L. M. et al. Interspecies cross-feeding orchestrates carbon degradation in the rumen ecosystem. Nat. Microbiol. 3, 12741284 (2018).

Article CAS PubMed PubMed Central Google Scholar

Khanal, S. K. Microbiology and biochemistry of anaerobic biotechnology. Anaerobic Biotechnology for Bioenergy Production: Principles and Applications (ed. Khanal, S. K.) 2940 (John Wiley & Sons, Inc., USA, 2008).

Lozupone, C. A., Stombaugh, J. I., Gordon, J. I., Jansson, J. K. & Knight, R. Diversity, stability and resilience of the human gut microbiota. Nature 489, 220230 (2012).

Article CAS PubMed PubMed Central Google Scholar

Weimer, P. J. Redundancy, resilience, and host specificity of the ruminal microbiota: Implications for engineering improved ruminal fermentations. Front. Microbiol. 6, 296 (2015).

Article PubMed PubMed Central Google Scholar

Gharechahi, J., Vahidi, M. F., DIng, X. Z., Han, J. L. & Salekdeh, G. H. Temporal changes in microbial communities attached to forages with different lignocellulosic compositions in cattle rumen. FEMS Microbiol. Ecol. 96, fiaa069 (2020).

Article CAS PubMed Google Scholar

Huttenhower, C. et al. Structure, function and diversity of the healthy human microbiome. Nature 486, 207214 (2012).

Article CAS Google Scholar

Coyte, K. Z., Schluter, J. & Foster, K. R. The ecology of the microbiome: Networks, competition, and stability. Science 350, 663666 (2015).

Article CAS PubMed Google Scholar

Relman, D. A. The human microbiome: ecosystem resilience and health. Nutr. Rev. 70, S2S9 (2012).

Article PubMed Google Scholar

Giongo, A. et al. Toward defining the autoimmune microbiome for type 1 diabetes. ISME J. 5, 8291 (2011).

Article CAS PubMed Google Scholar

de Cruz, P. et al. Characterization of the gastrointestinal microbiota in health and inflammatory bowel disease. Inflamm. Bowel Dis. 18, 372390 (2012).

Article PubMed Google Scholar

Johnson, A. J. et al. Daily sampling reveals personalized diet-microbiome associations in humans. Cell Host Microbe 25, 789802 (2019).

Article CAS PubMed Google Scholar

Amato, K. R. et al. The gut microbiota appears to compensate for seasonal diet variation in the Wild Black Howler Monkey (Alouatta pigra). Microb. Ecol. 69, 434443 (2015).

Article CAS PubMed Google Scholar

Springer, A. et al. Patterns of seasonality and group membership characterize the gut microbiota in a longitudinal study of wild Verreauxs sifakas (Propithecus verreauxi). Ecol. Evol. 7, 57325745 (2017).

Article PubMed PubMed Central Google Scholar

Maurice, C. F. et al. Marked seasonal variation in the wild mouse gut microbiota. ISME J. 9, 24232434 (2015).

Article CAS PubMed PubMed Central Google Scholar

Mackie, R. I. et al. Ecology of uncultivated Oscillospira species in the rumen of cattle, sheep, and reindeer as assessed by microscopy and molecular approaches. Appl Environ. Microbiol. 69, 68086815 (2003).

Article CAS PubMed PubMed Central Google Scholar

Ren, T. et al. Seasonal, spatial, and maternal effects on gut microbiome in wild red squirrels. Microbiome 5, 114 (2017).

Article Google Scholar

Flint, H. J., Scott, K. P., Duncan, S. H., Louis, P. & Forano, E. Microbial degradation of complex carbohydrates in the gut. Gut Microbes 3, 289306 (2012).

Article PubMed PubMed Central Google Scholar

White, B. A., Lamed, R., Bayer, E. A. & Flint, H. J. Biomass utilization by gut microbiomes. Annu. Rev. Microbiol. 68, 279296 (2014).

Article CAS PubMed Google Scholar

Gomez, A. et al. Temporal variation selects for diet-microbe co-metabolic traits in the gut of Gorilla spp. ISME J. 10, 514526 (2016).

Article CAS PubMed Google Scholar

Popovich, D. G. et al. The western lowland gorilla diet has implications for the health of humans and other hominoids. J. Nutr. 127, 20002005 (1997).

Article CAS PubMed Google Scholar

van der Hee, B. & Wells, J. M. Microbial regulation of host physiology by short-chain fatty acids. Trends Microbiol. 29, 700712 (2021).

Article PubMed Google Scholar

Bergman, E. N. Energy contributions of volatile fatty acids from the gastrointestinal tract in various species. Physiol. Rev. 70, 567590 (1990).

Article CAS PubMed Google Scholar

Kim, C. H., Park, J. & Kim, M. Gut microbiota-derived short-chain fatty acids, T cells, and inflammation. Immune Netw. 14, 277288 (2014).

Article PubMed PubMed Central Google Scholar

Hossain, K. S., Amarasena, S. & Mayengbam, S. B Vitamins and their roles in gut health. Microorganisms 10, 1168 (2022).

Article CAS PubMed PubMed Central Google Scholar

LeBlanc, J. G. et al. Bacteria as vitamin suppliers to their host: a gut microbiota perspective. Curr. Opin. Biotechnol. 24, 160168 (2013).

Article CAS PubMed Google Scholar

Zhang, S. et al. Gut microbiota serves a predictable outcome of short-term low-carbohydrate diet (LCD) intervention for patients with obesity. Microbiol. Spectr. 9, e0022321 (2021).

Article PubMed PubMed Central Google Scholar

Durrer, C. et al. A randomized controlled trial of pharmacist-led therapeutic carbohydrate and energy restriction in type 2 diabetes. Nat. Commun. 12, 18 (2021).

Article Google Scholar

Reimer, R. A. Establishing the role of diet in the microbiotadisease axis. Nat. Rev. Gastroenterol. Hepatol. 16, 8687 (2019).

Article PubMed Google Scholar

More here:
Gut microbiome responds compositionally and functionally to the ... - Nature.com

Related Posts

    Your Full Name

    Your Email

    Your Phone Number

    Select your age (30+ only)

    Select Your US State

    Program Choice

    Confirm over 30 years old

    Yes

    Confirm that you resident in USA

    Yes

    This is a Serious Inquiry

    Yes

    Message:



    matomo tracker